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Oliveira, Arlindo L
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ResearcherID: C-1700-2008
URL: http://www.researcherid.com/rid/C-1700-2008
Subject: Computer Science
Keywords: bioinformatics; computational biology; algorithms; complexity; string processing; machine learning
My Institutions (more details)
Primary Institution:
Sub-org/Dept: Department of Computer Science and Engineering; Instituto Superior Técnico
Role:
 
 
My Publications: View
   

This list contains papers that I have authored.

   
publication(s)  
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1. Title: Discriminative Learning of Bayesian Networks via Factorized Conditional Log-Likelihood
Author(s): Carvalho, Alexandra M.; Roos, Teemu; Oliveira, Arlindo L.; et al.
Source: Journal of Machine Learning Research Volume: 12 Pages: 2181-2210 Published: JUL 2011
Times Cited: 0
added
18-Nov-11
2. Title: Efficient alignment of pyrosequencing reads for re-sequencing applications
Author(s): Fernandes, F; da Fonseca, PGS; Russo, LMS; et al.
Source: Bmc Bioinformatics Volume: 12 Published: MAY 16 2011
Times Cited: 0
DOI: 10.1186/1471-2105-12-163
added
01-Jul-11
3. Title: Fully Compressed Suffix Trees
Author(s): Russo, Luis M. S.; Navarro, Gonzalo; Oliveira, Arlindo L.
Source: Acm Transactions on Algorithms Volume: 7 Issue: 4 Published: SEP 2011
Times Cited: 0
DOI: 10.1145/2000807.2000821
added
18-Nov-11
4. Title: GRISOTTO: A greedy approach to improve combinatorial algorithms for motif discovery with prior knowledge
Author(s): Carvalho, AM; Oliveira, AL
Source: Algorithms For Molecular Biology Volume: 6 Published: APR 22 2011
Times Cited: 0
DOI: 10.1186/1748-7188-6-13
added
01-Jul-11
5. Title: Haplotype inference with pseudo-Boolean optimization
Author(s): Graca, A; Marques-Silva, J; Lynce, I; et al.
Source: Annals of Operations Research Volume: 184 Issue: 1 Pages: 137-162 Published: APR 2011
Times Cited: 1
DOI: 10.1007/s10479-009-0675-4
added
04-Apr-11
6. Title: Qualitative modelling and formal verification of the FLR1 gene mancozeb response in Saccharomyces cerevisiae
Author(s): Monteiro, P. T.; Dias, P. J.; Ropers, D.; et al.
Source: Iet Systems Biology Volume: 5 Issue: 5 Pages: 308-316 Published: 2011
Times Cited: 0
DOI: 10.1049/iet-syb.2011.0001
added
23-Jan-12
7. Title: QUANTITATIVE MODELING OF THE SACCHAROMYCES CEREVISIAE FLR1 REGULATORY NETWORK USING AN S-SYSTEM FORMALISM
Author(s): Calcada, D.; Vinga, S.; Freitas, A. T.; et al.
Source: Journal of Bioinformatics and Computational Biology Volume: 9 Issue: 5 Pages: 613-630 Published: 2011
Times Cited: 1
DOI: 10.1142/s0219720011005690
added
23-Jan-12
8. Title: TFRank: network-based prioritization of regulatory associations underlying transcriptional responses
Author(s): Goncalves, J. P.; Francisco, A. P.; Mira, N. P.; et al.
Source: Bioinformatics Volume: 27 Issue: 22 Pages: 3149-3157 Published: 2011
Times Cited: 0
DOI: 10.1093/bioinformatics/btr546
added
23-Jan-12
9. Title: YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface
Author(s): Abdulrehman, D; Monteiro, PT; Teixeira, MC; et al.
Source: Nucleic Acids Research Volume: 39 Pages: D136-D140 Published: JAN 2011
Times Cited: 4
DOI: 10.1093/nar/gkq964
added
04-Apr-11
10. Title: A Data Mining Approach for the Detection of High-Risk Breast Cancer Groups
Author(s): Anunciacao, O; Gomes, BC; Vinga, S; et al.
Source: Advances in Bioinformatics Volume: 74 Pages: 43-51 Published: 2010
Times Cited: 0
added
29-Apr-11
publication(s)  
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