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Shimodaira, Hidetoshi
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ResearcherID: B-9127-2008
E-mail:
URL: http://www.researcherid.com/rid/B-9127-2008
Subject: Computer Science; Mathematics
Keywords: statistics; bioinformatics; phylogenetics; evolution; resampling; bootstrap; model selection
ORCID: http://orcid.org/0000-0002-3371-7724
My Institutions (more details)
Primary Institution:
Sub-org/Dept: Division of Mathematical Science; Graduate School of Engineering Science
Role:
Past Institutions: Tokyo Institute of Technology; Institute of Statistical Mathematics
Description:
My URLs: http://www.sigmath.es.osaka-u.ac.jp/shimo-lab/
 
 

This list contains papers that I have authored.

publication(s)  
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1. Title: Multiple comparisons of log-likelihoods with applications to phylogenetic inference
Author(s): SHIMODAIRA, H; HASEGAWA, M
Source: MOLECULAR BIOLOGY AND EVOLUTION Volume: 16 Issue: 8 Pages: 1114-1116 Published: AUG 1999
Times Cited: 2800
added
23-Jul-08
2. Title: An approximately unbiased test of phylogenetic tree selection
Author(s): SHIMODAIRA, H
Source: SYSTEMATIC BIOLOGY Volume: 51 Issue: 3 Pages: 492-508 Published: MAY-JUN 2002
Times Cited: 1308
DOI: 10.1080/10635150290069913
added
23-Jul-08
3. Title: CONSEL: for assessing the confidence of phylogenetic tree selection
Author(s): SHIMODAIRA, H; HASEGAWA, M
Source: BIOINFORMATICS Volume: 17 Issue: 12 Pages: 1246-1247 Published: DEC 2001
Times Cited: 1308
added
23-Jul-08
4. Title: Pvclust: an R package for assessing the uncertainty in hierarchical clustering
Author(s): SUZUKI, R; SHIMODAIRA, H
Source: BIOINFORMATICS Volume: 22 Issue: 12 Pages: 1540-1542 Published: JUN 15 2006
Times Cited: 662
DOI: 10.1093/bioinformatics/btl117
added
23-Jul-08
5. Title: Mitochondrial genome variation in Eastern Asia and the peopling of Japan
Author(s): TANAKA, M; CABRERA, VM; GONZALEZ, AM; et al.
Source: GENOME RESEARCH Volume: 14 Issue: 10A Pages: 1832-1850 Published: OCT 2004
Times Cited: 299
DOI: 10.1101/gr.2286304
added
23-Jul-08
6. Title: Improving predictive inference under covariate shift by weighting the log-likelihood function
Author(s): SHIMODAIRA, H
Source: JOURNAL OF STATISTICAL PLANNING AND INFERENCE Volume: 90 Issue: 2 Pages: 227-244 Published: OCT 1 2000
Times Cited: 194
added
23-Jul-08
7. Title: Approximately unbiased tests of regions using multistep-multiscale bootstrap resampling
Author(s): SHIMODAIRA, H
Source: ANNALS OF STATISTICS Volume: 32 Issue: 6 Pages: 2616-2641 Published: DEC 2004
Times Cited: 146
DOI: 10.1214/009053604000000823
added
23-Jul-08
8. Title: Quantitative transcriptional control of ErbB receptor signaling undergoes graded to biphasic response for cell differentiation
Author(s): NAGASHIMA, T; SHIMODAIRA, H; IDE, K; et al.
Source: JOURNAL OF BIOLOGICAL CHEMISTRY Volume: 282 Issue: 6 Pages: 4045-4056 Published: FEB 9 2007
Times Cited: 80
DOI: 10.1074/jbc.M608653200
added
23-Jul-08
9. Title: Evaluating hypotheses on the origin and evolution of the New Zealand alpine cicadas (maoricicada) using multiple-comparison tests of tree topology
Author(s): BUCKLEY, TR; SIMON, C; SHIMODAIRA, H; et al.
Source: MOLECULAR BIOLOGY AND EVOLUTION Volume: 18 Issue: 2 Pages: 223-234 Published: FEB 2001
Times Cited: 75
added
23-Jul-08
10. Title: Appropriate likelihood ratio tests and marginal distributions for evolutionary tree models with constraints on parameters
Author(s): OTA, R; WADDELL, PJ; HASEGAWA, M; et al.
Source: MOLECULAR BIOLOGY AND EVOLUTION Volume: 17 Issue: 5 Pages: 798-803 Published: MAY 2000
Times Cited: 64
added
23-Jul-08
publication(s)  
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