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Graham, David E
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ResearcherID: F-8578-2010
Subject: Biochemistry & Molecular Biology; Environmental Sciences & Ecology; Microbiology
Keywords: microbiology; biochemistry; archaea; methanogenesis; polyamines; sulfur
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Primary Institution:
Joint Affiliation:
Sub-org/Dept: Microbiology Department
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This list contains papers that I have authored.

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1. Title: Engineering acidic Streptomyces rubiginosus d-xylose isomerase by rational enzyme design
Author(s): Waltman, Mary Jo; Yang, Zamin Koo; Langan, Paul; et al.
Source: Protein Engineering Design and Selection Volume: 27 Issue: 2 Pages: 59-64 Published: 2014
Author-provided URL :
2. Title: X-ray crystallographic studies of family 11 xylanase Michaelis and product complexes: implications for the catalytic mechanism
Author(s): Wan, Qun; Zhang, Qiu; Hamilton-Brehm, Scott; et al.
Source: Acta Crystallographica Section D Volume: 70 Issue: 1 Pages: 11-23 Published: 2014
DOI: 10.1107/S1399004713023626 / Author-provided URL :
3. Title: Heterologous expression, purification, crystallization and preliminary X-ray analysis of Trichoderma reesei xylanase II and four variants
Author(s): Wan, Qun; Kovalevsky, Andrey; Zhang, Qiu; et al.
Source: Acta Crystallographica Section F-Structural Biology and Crystallization Communications Volume: 69 Pages: 320-323 Published: MAR 2013
Times Cited: 1
DOI: 10.1107/S1744309113001164
4. Title: Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park
Author(s): Podar, Mircea; Makarova, Kira S.; Graham, David E.; et al.
Source: Biology Direct Volume: 8 Published: APR 22 2013
Times Cited: 4
DOI: 10.1186/1745-6150-8-9
5. Title: Nitrogen and sulfur requirements for Clostridium thermocellum and Caldicellulosiruptor bescii on cellulosic substrates in minimal nutrient media
Author(s): Kridelbaugh, Donna M.; Nelson, Joshua; Engle, Nancy L.; et al.
Source: Bioresource Technology Volume: 130 Pages: 125-135 Published: FEB 2013
Times Cited: 7
DOI: 10.1016/j.biortech.2012.12.006
6. Title: Combined inactivation of the Clostridium cellulolyticum lactate and malate dehydrogenase genes substantially increases ethanol yield from cellulose and switchgrass fermentations
Author(s): Li, Yongchao; Tschaplinski, Timothy J.; Engle, Nancy L.; et al.
Source: Biotechnology For Biofuels Volume: 5 Published: JAN 4 2012
Times Cited: 19
DOI: 10.1186/1754-6834-5-2
7. Title: Microbes in thawing permafrost: the unknown variable in the climate change equation
Author(s): Graham, David E.; Wallenstein, Matthew D.; Vishnivetskaya, Tatiana A.; et al.
Source: Isme Journal Volume: 6 Issue: 4 Pages: 709-712 Published: APR 2012
Times Cited: 8
DOI: 10.1038/ismej.2011.163
8. Title: 2-Oxoacid Metabolism in Methanogenic CoM and CoB Biosynthesis
Author(s): Graham, David E.
Source: Methods in Enzymology Volume: Volume 494 Pages: 301-326 Published: 2011
Times Cited: 3
DOI: 10.1016/B978-0-12-385112-3.00015-9 / Author-provided URL : ...
9. Title: Label-free Quantitative Proteomics for the Extremely Thermophilic Bacterium Caldicellulosiruptor obsidiansis Reveal Distinct Abundance Patterns upon Growth on Cellobiose, Crystalline Cellulose, and Switchgrass
Author(s): Lochner, Adriane; Giannone, Richard J.; Keller, Martin; et al.
Source: Journal of Proteome Research Volume: 10 Issue: 12 Pages: 5302-5314 Published: DEC 2011
Times Cited: 10
DOI: 10.1021/pr200536j
10. Title: Use of Label-Free Quantitative Proteomics To Distinguish the Secreted Cellulolytic Systems of Caldicellulosiruptor bescii and Caldicellulosiruptor obsidiansis
Author(s): Lochner, Adriane; Giannone, Richard J.; Rodriguez, Miguel, Jr.; et al.
Source: Appl. Environ. Microbiol. Volume: 77 Issue: 12 Pages: 4042-4054 Published: June 15, 2011
Times Cited: 14
DOI: 10.1128/AEM.02811-10 / Author-provided URL :
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