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Parks, Jerry M
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ResearcherID: B-7488-2009
URL: http://www.researcherid.com/rid/B-7488-2009
Subject: Biochemistry & Molecular Biology; Biophysics; Chemistry
My Institutions (more details)
Primary Institution:
Sub-org/Dept: Center for Molecular Biophysics
Role:
My URLs: http://cmb.ornl.gov/people/jpc
 
 

This list contains papers that I have authored.

publication(s)  
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1. Title: The Genetic Basis for Bacterial Mercury Methylation
Author(s): Parks, Jerry M.; Johs, Alexander; Podar, Mircea; et al.
Source: Science Volume: 339 Issue: 6125 Pages: 1332-1335 Published: MAR 15 2013
Times Cited: 41
DOI: 10.1126/science.1230667
added
19-Sep-13
2. Title: Quantum mechanics/molecular mechanics minimum free-energy path for accurate reaction energetics in solution and enzymes: Sequential sampling and optimization on the potential of mean force surface
Author(s): HU, H; LU, ZY; PARKS, JM; et al.
Source: JOURNAL OF CHEMICAL PHYSICS Volume: 128 Issue: 3 Published: 2008
Times Cited: 36
DOI: 10.1063/1.2816557
added
19-Jun-09
3. Title: Mutant alcohol dehydrogenase leads to improved ethanol tolerance in Clostridium thermocellum
Author(s): Brown, Steven D.; Guss, Adam M.; Karpinets, Tatiana V.; et al.
Source: Proceedings of the National Academy of Sciences of the United States of America Volume: 108 Issue: 33 Pages: 13752-13757 Published: 2011
Times Cited: 36
DOI: 10.1073/pnas.1102444108
added
31-Aug-11
4. Title: Experimental validation of the docking orientation of Cdc25 with its Cdk2-CycA protein substrate
Author(s): SOHN, R; PARKS, JM; BUHRMAN, G; et al.
Source: BIOCHEMISTRY Volume: 44 Pages: 16563-16573 Published: 2005
Times Cited: 20
DOI: 10.1021/bi0516879
added
19-Jun-09
5. Title: Quantum chemical characterization of the reactions of guanine with the phenylnitrenium ion
Author(s): PARKS, JM; FORD, GP; CRAMER, CJ
Source: JOURNAL OF ORGANIC CHEMISTRY Volume: 66 Issue: 26 Pages: 8997-9004 Published: DEC 28 2001
Times Cited: 20
DOI: 10.1021/jo016066
added
19-Jun-09
6. Title: Mechanism of Hg-C Protonolysis in the Organomercurial Lyase MerB
Author(s): PARKS, JM; GUO, H; MOMANY, C; et al.
Source: Journal of the American Chemical Society Volume: 131 Issue: 37 Pages: 13278-13285 Published: 2009
Times Cited: 15
DOI: 10.1021/ja9016123
added
16-Jul-10
7. Title: Radical Coupling Reactions in Lignin Synthesis: A Density Functional Theory Study
Author(s): Sangha, A. K.; Parks, J. M.; Standaert, R. F.; et al.
Source: Journal of Physical Chemistry B Volume: 116 Issue: 16 Pages: 4760-4768 Published: 2012
Times Cited: 13
DOI: 10.1021/jp2122449
added
18-May-12
8. Title: A pseudobond parametrization for improved electrostatics in quantum mechanical/molecular mechanical simulations of enzymes
Author(s): PARKS, JM; HU, H; COHEN, AJ; et al.
Source: JOURNAL OF CHEMICAL PHYSICS Volume: 129 Issue: 15 Published: 2008
Times Cited: 11
DOI: 10.1063/1.2994288
added
19-Jun-09
9. Title: Mechanism of Cdc25B Phosphatase with the Small Molecule Substrate p-Nitrophenyl Phosphate from QM/MM-MFEP Calculations
Author(s): Parks, Jerry M.; Hu, Hao; Rudolph, Johannes; et al.
Source: Journal of Physical Chemistry B Volume: 113 Issue: 15 Pages: 5217-5224 Published: 2009
Times Cited: 11
DOI: 10.1021/jp805137x
added
11-Feb-13
10. Title: Molecular simulation as a tool for studying lignin
Author(s): Sangha, Amandeep K.; Petridis, Loukas; Smith, Jeremy C.; et al.
Source: Environmental Progress & Sustainable Energy Volume: 31 Issue: 1 Pages: 47-54 Published: 2012
Times Cited: 10
DOI: 10.1002/ep.10628
added
16-Feb-12
publication(s)  
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