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Svozil, Daniel
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ResearcherID: D-4407-2009
URL: http://www.researcherid.com/rid/D-4407-2009
Subject: Biochemistry & Molecular Biology; Biophysics; Chemistry; Life Sciences & Biomedicine - Other; Mathematical & Computational Biology
Keywords: bioinformatics; data mining; machine learning; nucleic acids; structural bioinformatics; molecular dynamics; quantum chemistry; high throughput screening; statistical analysis; cheminformatics
ORCID: http://orcid.org/0000-0003-2577-5163
My Institutions (more details)
Primary Institution:
Sub-org/Dept: Laboratory of Informatics and Chemistry
Role:
Joint Affiliation:
Sub-org/Dept:
Role:
My URLs: http://ich.vscht.cz/~svozil
 
 

This list contains papers that I have authored.

publication(s)  
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1.  Title: Nonpher: computational method for design of hard-to-synthesize structures
 Author(s): Vorsilak, Milan; Svozil, Daniel
 Source: Journal of Cheminformatics Volume: 9 Published: MAR 20 2017
 Times Cited: 0
 DOI: 10.1186/s13321-017-0206-2
added
15-Aug-17
2.  Title: Probes & Drugs portal: an interactive, open data resource for chemical biology
 Author(s): Skuta, Ctibor; Popr, Martin; Muller, Tomas; et al.
 Source: Nature Methods Volume: 14 Issue: 8 Pages: 758-759 Published: AUG 2017
 Times Cited: 0
added
15-Aug-17
3.  Title: Multiple 3D RNA Structure Superposition Using Neighbor Joining
 Author(s): Hoksza, David; Svozil, Daniel
 Source: Ieee-Acm Transactions on Computational Biology and Bioinformatics Volume: 12 Issue: 3 Pages: 520-530 Published: 2015
 Times Cited: 3
 DOI: 10.1109/tcbb.2014.2351810
added
09-May-16
4.  Title: MultiSETTER: web server for multiple RNA structure comparison
 Author(s): Cech, Petr; Hoksza, David; Svozil, Daniel
 Source: Bmc Bioinformatics Volume: 16 Published: 2015
 Times Cited: 3
 DOI: 10.1186/s12859-015-0696-8
added
09-May-16
5.  Title: Bioinformatic analysis of the protein/DNA interface
 Author(s): Schneider, B.; Cerny, J.; Svozil, D.; et al.
 Source: Nucleic Acids Research Volume: 42 Issue: 5 Pages: 3381-3394 Published: 2014
 Times Cited: 11
 DOI: 10.1093/nar/gkt1273
added
04-Jun-14
6.  Title: InCHlib - interactive cluster heatmap for web applications
 Author(s): Skuta, Ctibor; Bartunek, Petr; Svozil, Daniel
 Source: Journal of Cheminformatics Volume: 6 Published: 2014
 Times Cited: 13
 DOI: 10.1186/s13321-014-0044-4
added
09-May-16
7.  Title: Molpher: a software framework for systematic chemical space exploration
 Author(s): Hoksza, D.; Skoda, P.; Vorsilak, M.; et al.
 Source: Journal of Cheminformatics Volume: 6 Pages: 13 Published: 2014
 Times Cited: 15
 DOI: 10.1186/1758-2946-6-7
added
04-Jun-14
8.  Title: Automatic workflow for the classification of local DNA conformations
 Author(s): Cech, Petr; Kukal, Jaromir; Cerny, Jiri; et al.
 Source: Bmc Bioinformatics Volume: 14 Published: JUN 25 2013
 Times Cited: 7
 DOI: 10.1186/1471-2105-14-205
added
23-Jan-14
9.  Title: Benchmark quantum-chemical calculations on a complete set of rotameric families of the DNA sugar-phosphate backbone and their comparison with modern density functional theory
 Author(s): Mladek, Arnost; Krepl, Miroslav; Svozil, Daniel; et al.
 Source: Physical Chemistry Chemical Physics Volume: 15 Issue: 19 Pages: 7295-7310 Published: 2013
 Times Cited: 18
 DOI: 10.1039/c3cp44383c
added
23-Jan-14
10.  Title: Developing and Implementing a Combined Chemistry and Informatics Curriculum for Undergraduate and Graduate Students in the Czech Republic
 Author(s): Jirat, Jiri; Cech, Petr; Znamenacek, Jiri; et al.
 Source: Journal of Chemical Education Volume: 90 Issue: 3 Pages: 315-319 Published: MAR 2013
 Times Cited: 1
 DOI: 10.1021/ed3001446
added
23-Jan-14
publication(s)  
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