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Gonçalves, Joana P.
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ResearcherID: B-2330-2009
Other Names: Joana Pinho Gonçalves
URL: http://www.researcherid.com/rid/B-2330-2009
Subject: Computer Science; Mathematical & Computational Biology
ORCID: http://orcid.org/0000-0001-6072-9627
My Institutions (more details)
Primary Institution:
Sub-org/Dept: Pattern Recognition and Bioinformatics group; Faculty of Electrical Engineering, Mathematics and Computer Science; Department of Intelligent Systems
Role:
Joint Affiliation:
My URLs: http://joanagoncalves.org
 

My Publications

My Publications (12)

ResearcherID labs

 

This list contains papers that I have authored.

publication(s)  
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1.  Title: The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae.
 Author(s): Teixeira MC; Monteiro PT; Guerreiro JF; et al.
 Times Cited: 95
 DOI: 10.1093/nar/gkt1015 /  Author-provided URL : http://europepmc.org/abstract/med/24170807
added
05-Dec-14
2.  Title: Candidate gene prioritization by network analysis of differential expression using machine learning approaches
 Author(s): Nitsch, D; Goncalves, JP; Ojeda, F; et al.
 Source: Bmc Bioinformatics Volume: 11 Published: SEP 14 2010
 Times Cited: 52
 DOI: 10.1186/1471-2105-11-460
added
16-Nov-10
3.  Title: PINTA: a web server for network-based gene prioritization from expression data
 Author(s): Nitsch, Daniela; Tranchevent, Leon-Charles; Goncalves, Joana P.; et al.
 Source: Nucleic Acids Research Volume: 39 Pages: W334-W338 Published: JUL 2011
 Times Cited: 35
 DOI: 10.1093/nar/gkr289
added
31-Aug-11
4.  Title: Predicting disease associations via biological network analysis.
 Author(s): Sun K; Gonçalves JP; Larminie C; et al.
 Times Cited: 19
 DOI: 10.1186/1471-2105-15-304 /  Author-provided URL : http://europepmc.org/abstract/med/25228247
added
21-Jul-15
5.  Title: Interactogeneous: Disease Gene Prioritization Using Heterogeneous Networks and Full Topology Scores
 Author(s): Goncalves, Joana P.; Francisco, Alexandre P.; Moreau, Yves; et al.
 Source: Plos One Volume: 7 Issue: 11 Published: NOV 19 2012
 Times Cited: 15
 DOI: 10.1371/journal.pone.0049634
added
25-Oct-13
6.  Title: POLAR MAPPER: a computational tool for integrated visualization of protein interaction networks and mRNA expression data
 Author(s): GONCALVES, JP; GRAOS, M; VALENTE, AXCN
 Source: JOURNAL OF THE ROYAL SOCIETY INTERFACE Volume: 6 Issue: 39 Pages: 881-896 Published: OCT 6 2009
 Times Cited: 8
 DOI: 10.1098/rsif.2008.0407
added
03-Nov-09
7.  Title: TFRank: network-based prioritization of regulatory associations underlying transcriptional responses
 Author(s): Goncalves, Joana P.; Francisco, Alexandre P.; Mira, Nuno P.; et al.
 Source: Bioinformatics Volume: 27 Issue: 22 Pages: 3149-3157 Published: NOV 15 2011
 Times Cited: 8
 DOI: 10.1093/bioinformatics/btr546
added
11-Sep-12
8.  Title: Regulatory Snapshots: Integrative Mining of Regulatory Modules from Expression Time Series and Regulatory Networks
 Author(s): Goncalves, Joana P.; Aires, Ricardo S.; Francisco, Alexandre P.; et al.
 Source: Plos One Volume: 7 Issue: 5 Published: MAY 1 2012
 Times Cited: 4
 DOI: 10.1371/journal.pone.0035977
added
11-Sep-12
9.  Title: LateBiclustering: Efficient Heuristic Algorithm for Time-Lagged Bicluster Identification
 Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics Published: 2014
 Times Cited: 3
 DOI: 10.1109/TCBB.2014.2312007
added
05-Dec-14
10.  Title: AliBiMotif: Integrating alignment and biclustering to unravel Transcription Factor Binding Sites in DNA sequences
 Author(s): Goncalves, Joana P.; Moreau, Yves; Madeira, Sara C.
 Source: International Journal of Data Mining and Bioinformatics Volume: 6 Issue: 2 Pages: 196-215 Published: 2012
 Times Cited: 2
 DOI: 10.1504/IJDMB.2012.048198
added
11-Sep-12
publication(s)  
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