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Bauer, Denis C.
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ResearcherID: C-3903-2009
URL: http://www.researcherid.com/rid/C-3903-2009
Subject: Computer Science; Genetics & Heredity; Mathematical & Computational Biology; Psychiatry
Keywords: bioinformatics ; computational biology ;
My Institutions (more details)
Primary Institution:
Sub-org/Dept: Computational Informatics
Role:
My URLs: www.allPower.de
 
 

This list contains papers that I have authored.

publication(s)  
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1.  Title: The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
 Author(s): SUZUKI, H; FORREST, ARR; VAN NIMWEGEN, E; et al.
 Source: NATURE GENETICS Volume: 41 Issue: 5 Pages: 553-562 Published: 2009
 Times Cited: 261
 DOI: 10.1038/ng.375
added
08-Sep-09
2.  Title: Triplexator: Detecting nucleic acid triple helices in genomic and transcriptomic data
 Author(s): Buske, Fabian A.; Bauer, Denis C.; Mattick, John S.; et al.
 Source: Genome Research Volume: 22 Issue: 7 Pages: 1372-1381 Published: JUL 2012
 Times Cited: 44
 DOI: 10.1101/gr.130237.111
added
12-Jul-13
3.  Title: A Comparative Study of Techniques for Differential Expression Analysis on RNA-Seq Data
 Author(s): Zhang, Zong Hong; Jhaveri, Dhanisha J.; Marshall, Vikki M.; et al.
 Source: Plos One Volume: 9 Issue: 8 Published: AUG 13 2014
 Times Cited: 43
 DOI: 10.1371/journal.pone.0103207
added
18-Dec-16
4.  Title: Assigning roles to DNA regulatory motifs using comparative genomics
 Author(s): Buske, FA; Boden, M; Bauer, DC; et al.
 Source: Bioinformatics Volume: 26 Issue: 7 Pages: 860-866 Published: 2010
 Times Cited: 38
 DOI: 10.1093/bioinformatics/btq049
added
21-Nov-10
5.  Title: Early life events influence whole-of-life metabolic health via gut microflora and gut permeability
 Author(s): Kerr, Caroline A.; Grice, Desma M.; Tran, Cuong D.; et al.
 Source: Critical Reviews in Microbiology Volume: 41 Issue: 3 Pages: 326-340 Published: AUG 2015
 Times Cited: 22
 DOI: 10.3109/1040841X.2013.837863
added
18-Dec-16
6.  Title: Blue: correcting sequencing errors using consensus and context
 Author(s): Greenfield, Paul; Duesing, Konsta; Papanicolaou, Alexie; et al.
 Source: Bioinformatics Volume: 30 Issue: 19 Pages: 2723-2732 Published: OCT 1 2014
 Times Cited: 21
 DOI: 10.1093/bioinformatics/btu368
added
18-Dec-16
7.  Title: Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations
 Author(s): Taberlay, Phillippa C.; Achinger-Kawecka, Joanna; Lun, Aaron T. L.; et al.
 Source: Genome Research Volume: 26 Issue: 6 Pages: 719-731 Published: JUN 2016
 Times Cited: 13
 DOI: 10.1101/gr.201517.115
added
18-Dec-16
8.  Title: Hybridization-based reconstruction of small non-coding RNA transcripts from deep sequencing data
 Author(s): Ragan, Chikako; Mowry, Bryan J.; Bauer, Denis C.
 Source: Nucleic Acids Research Volume: 40 Issue: 16 Pages: 7633-7643 Published: SEP 2012
 Times Cited: 11
 DOI: 10.1093/nar/gks505
added
12-Jul-13
9.  Title: Cpipe: a shared variant detection pipeline designed for diagnostic settings
 Author(s): Sadedin, Simon P.; Dashnow, Harriet; James, Paul A.; et al.
 Source: Genome Medicine Volume: 7 Published: JUL 10 2015
 Times Cited: 11
 DOI: 10.1186/s13073-015-0191-x
added
18-Dec-16
10.  Title: Sorting the nuclear proteome
 Author(s): Bauer, DC; Willadsen, K; Buske, FA; et al.
 Source: Bioinformatics Volume: 27 Issue: 13 Pages: I7-I14 Published: 2011
 Times Cited: 10
 DOI: 10.1093/bioinformatics/btr217
added
11-Jul-11
publication(s)  
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