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Yoo, Jejoong
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ResearcherID: G-5957-2010
URL: http://www.researcherid.com/rid/G-5957-2010
ORCID: http://orcid.org/0000-0001-7120-8464
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This list contains papers that I have authored.

publication(s)  
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1.  Title: Improved Parametrization of Li(+), Na(+), K(+), and Mg(2+) Ions for All-Atom Molecular Dynamics Simulations of Nucleic Acid Systems
 Author(s): Yoo, Jejoong; Aksimentiev, Aleksei
 Source: Journal of Physical Chemistry Letters Volume: 3 Issue: 1 Pages: 45-50 Published: 2012
 Times Cited: 91
 DOI: 10.1021/jz201501a
added
29-Mar-12
2.  Title: Does arginine remain protonated in the lipid membrane? Insights from microscopic pK(a) calculations
 Author(s): Yoo, J; Cui, Q
 Source: Biophysical Journal Volume: 94 Issue: 8 Pages: L61-L63 Published: 2008
 Times Cited: 71
 DOI: 10.1529/biophysj.107.122945
added
23-Dec-10
3.  Title: Modeling and Simulation of Ion Channels
 Author(s): Maffeo, C.; Bhattacharya, S.; Yoo, J.; et al.
 Source: Chemical Reviews Volume: 112 Issue: 12 Pages: 6250-6284 Published: 2012
 Times Cited: 67
 DOI: 10.1021/cr3002609
added
15-Apr-13
4.  Title: In situ structure and dynamics of DNA origami determined through molecular dynamics simulations
 Author(s): Yoo, J.; Aksimentiev, A.
 Source: Proceedings of the National Academy of Sciences of the United States of America Volume: 110 Issue: 50 Pages: 20099-20104 Published: 2013
 Times Cited: 51
 DOI: 10.1073/pnas.1316521110
added
11-Apr-14
5.  Title: A finite element framework for studying the mechanical response of macromolecules: Application to the gating of the mechanosensitive channel MscL
 Author(s): Tang, YY; Cao, GX; Chen, X; et al.
 Source: Biophysical Journal Volume: 91 Issue: 4 Pages: 1248-1263 Published: 2006
 Times Cited: 47
 DOI: 10.1529/biophysj.106.085985
added
23-Dec-10
6.  Title: Curvature Generation and Pressure Profile Modulation in Membrane by Lysolipids: Insights from Coarse-Grained Simulations
 Author(s): Yoo, J; Cui, Q
 Source: Biophysical Journal Volume: 97 Issue: 8 Pages: 2267-2276 Published: 2009
 Times Cited: 42
 DOI: 10.1016/j.bpj.2009.07.051
added
23-Dec-10
7.  Title: Competitive Binding of Cations to Duplex DNA Revealed through Molecular Dynamics Simulations
 Author(s): Yoo, J.; Aksimentiev, A.
 Source: Journal of Physical Chemistry B Volume: 116 Issue: 43 Pages: 12946-12954 Published: 2012
 Times Cited: 38
 DOI: 10.1021/jp306598y
added
27-Dec-12
8.  Title: Gating mechanisms of mechanosensitive channels of large conductance, I: A continuum mechanics-based hierarchical framework
 Author(s): Chen, X; Cui, Q; Tang, YY; et al.
 Source: Biophysical Journal Volume: 95 Issue: 2 Pages: 563-580 Published: 2008
 Times Cited: 27
 DOI: 10.1529/biophysj.107.128488
added
23-Dec-10
9.  Title: Close encounters with DNA
 Author(s): Maffeo, C.; Yoo, J.; Comer, J.; et al.
 Source: Journal of Physics-Condensed Matter Volume: 26 Issue: 41 Published: 2014
 Times Cited: 21
 DOI: 10.1088/0953-8984/26/41/413101
added
28-May-15
10.  Title: Gating mechanisms of mechanosensitive channels of large conductance, II: Systematic study of conformational transitions
 Author(s): Tang, YY; Yoo, J; Yethiraj, A; et al.
 Source: Biophysical Journal Volume: 95 Issue: 2 Pages: 581-596 Published: 2008
 Times Cited: 20
 DOI: 10.1529/biophysj.107.128496
added
23-Dec-10
publication(s)  
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