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Khalid, Syma
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ResearcherID: B-8108-2009
URL: http://www.researcherid.com/rid/B-8108-2009
ORCID: http://orcid.org/0000-0002-3694-5044
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This list contains papers that I have authored.

publication(s)  
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1.  Title: Correction to Molecular Dynamics Simulations of Phosphatidylcholine Membranes: A Comparative Force Field Study.
 Author(s): Piggot, Thomas J; Pineiro, Angel; Khalid, Syma
 Source: Journal of chemical theory and computation Volume: 13 Issue: 4 Pages: 1862-1865 Published: 2017-Apr-11
 DOI: 10.1021/acs.jctc.7b00244
added
02-May-17
2.  Title: PyCGTOOL: Automated Generation of Coarse-Grained Molecular Dynamics Models from Atomistic Trajectories.
 Author(s): Graham, James A; Essex, Jonathan W; Khalid, Syma
 Source: Journal of chemical information and modeling Published: 2017-Apr-04
 DOI: 10.1021/acs.jcim.7b00096
added
02-May-17
3.  Title: Through the Lipopolysaccharide Glass: A Potent Antimicrobial Peptide Induces Phase Changes in Membranes
 Author(s): Jefferies, Damien; Hsu, Pin-Chia; Khalid, Syma
 Source: Biochemistry Volume: 56 Issue: 11 Pages: 1672-1679 Published: MAR 21 2017
 Times Cited: 3
 DOI: 10.1021/acs.biochem.6b01063
added
02-May-17
4.  Title: Dynamics of Crowded Vesicles: Local and Global Responses to Membrane Composition
 Author(s): Holdbrook, Daniel A.; Huber, Roland G.; Piggot, Thomas J.; et al.
 Source: Plos One Volume: 11 Issue: 6 Published: JUN 16 2016
 Times Cited: 5
 DOI: 10.1371/journal.pone.0156963
added
12-Aug-16
5.  Title: Encapsulated membrane proteins: A simplified system for molecular simulation
 Author(s): Lee, Sarah C.; Khalid, Syma; Pollock, Naomi L.; et al.
 Source: Biochimica Et Biophysica Acta-Biomembranes Volume: 1858 Issue: 10 Pages: 2549-2557 Published: OCT 2016
 Times Cited: 3
 DOI: 10.1016/j.bbamem.2016.02.039
added
30-Sep-16
6.  Title: Molecular Dynamics Simulations Predict the Pathways via Which Pristine Fullerenes Penetrate Bacterial Membranes
 Author(s): Hsu, Pin-Chia; Jefferies, Damien; Khalid, Syma
 Source: Journal of Physical Chemistry B Volume: 120 Issue: 43 Pages: 11170-11179 Published: NOV 3 2016
 Times Cited: 4
 DOI: 10.1021/acs.jpcb.6b06615
added
19-Jan-17
7.  Title: Molecular Dynamics Simulations Reveal the Conformational Flexibility of Lipid II and Its Loose Association with the Defensin Plectasin in the Staphylococcus aureus Membrane
 Author(s): Witzke, Sarah; Petersen, Michael; Carpenter, Timothy S.; et al.
 Source: Biochemistry Volume: 55 Issue: 23 Pages: 3303-3314 Published: JUN 14 2016
 Times Cited: 1
 DOI: 10.1021/acs.biochem.5b01315
added
12-Aug-16
8.  Title: OmpA: A Flexible Clamp for Bacterial Cell Wall Attachment.
 Author(s): Samsudin, Firdaus; Ortiz-Suarez, Maite L; Piggot, Thomas J; et al.
 Source: Structure (London, England : 1993) Published: 2016-Nov-8
 DOI: 10.1016/j.str.2016.10.009
added
19-Jan-17
9.  Title: Structural basis for Mep2 ammonium transceptor activation by phosphorylation
 Author(s): van den Berg, Bert; Chembath, Anupama; Jefferies, Damien; et al.
 Source: Nature Communications Volume: 7 Published: APR 2016
 Times Cited: 4
 DOI: 10.1038/ncomms11337
added
12-Aug-16
10.  Title: The Free Energy of Small Solute Permeation through the Escherichia coli Outer Membrane Has a Distinctly Asymmetric Profile
 Author(s): Carpenter, Timothy S.; Parkin, Jamie; Khalid, Syma
 Source: Journal of Physical Chemistry Letters Volume: 7 Issue: 17 Pages: 3446-3451 Published: SEP 1 2016
 Times Cited: 6
 DOI: 10.1021/acs.jpclett.6b01399
added
30-Sep-16
publication(s)  
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